usefragsph not on
There are 25 ligand heavy atoms
Ligand center of coords (x y z): 34.76328 27.79732 21.24644
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 934
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 510
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 508
Number of spheres polar: 142, nonpolar: 196, out of current total: 508
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 24.79294 44.69730 17.90442 37.58514 11.55579 24.53600
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 318
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 281
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 269
Spheres center of coords (x y z): 33.2102339405204 27.7428327137547 18.7784957992565
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.64230141019118
Final number of output spheres is: 60
Number of polar spheres: 15
Number of nonpolar spheres: 28
Number of spheres that are near neither polar nor nonpolar receptor atoms: 17
Final number of spheres that are from crystallographic ligand: 25