usefragsph not on
There are 31 ligand heavy atoms
Ligand center of coords (x y z): 55.1902903225807 32.9158709677419 35.7205483870968
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1243
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 647
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 644
Number of spheres polar: 199, nonpolar: 222, out of current total: 644
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 45.19443 65.16906 23.06563 42.88170 28.70377 45.67183
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 269
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 242
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 230
Spheres center of coords (x y z): 54.8042327391304 34.2720539565217 35.5180206521739
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.32953792410586
Final number of output spheres is: 45
Number of polar spheres: 17
Number of nonpolar spheres: 12
Number of spheres that are near neither polar nor nonpolar receptor atoms: 16
Final number of spheres that are from crystallographic ligand: 31