usefragsph not on
There are 41 ligand heavy atoms
Ligand center of coords (x y z): 32.6546829268293 29.092 19.7041219512195
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1252
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 672
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 667
Number of spheres polar: 207, nonpolar: 253, out of current total: 667
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 22.67392 42.55623 19.09421 38.91801 11.24033 24.54900
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 262
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 222
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 207
Spheres center of coords (x y z): 31.9779156521739 28.9063886956522 18.0400074396135
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.61269043057747
Final number of output spheres is: 45
Number of polar spheres: 16
Number of nonpolar spheres: 22
Number of spheres that are near neither polar nor nonpolar receptor atoms: 7
Final number of spheres that are from crystallographic ligand: 41