There are 14 ligand heavy atoms Ligand center of coords (x y z): 42.4205 13.9790714285714 66.5638571428571 useligsph not on Starting number of spheres from sph/sph cluster 0: 965 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 817 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 813 Number of spheres polar: 348, nonpolar: 325, out of current total: 813 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 30.45317 54.33820 1.98871 25.92862 55.10411 76.08466 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 274 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 199 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 42.4205 13.9790714285714 66.5638571428571 Center point: 149 xyz: 42.52951 13.98905 66.82947 After continuity checking, number of spheres is: 161 Spheres center of coords (x y z): 39.5369101863354 13.069120621118 68.6995414906832 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 43.8668744537148 16.2700826380612 55.8042212951925 Average weighted-distance for final elimination is: 31.9227475282209 Final number of output spheres is: 120 Number of polar spheres: 63 Number of nonpolar spheres: 30 Number of spheres that are near neither polar nor nonpolar receptor atoms: 27 Final number of spheres that are from crystallographic ligand: 0