usefragsph not on
There are 14 ligand heavy atoms
Ligand center of coords (x y z): 42.4205 13.9790714285714 66.5638571428571
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 965
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 620
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 619
Number of spheres polar: 246, nonpolar: 269, out of current total: 619
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 32.46946 52.23108 3.99728 23.95645 60.07435 76.08466
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 325
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 273
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 260
Spheres center of coords (x y z): 41.1728793461538 12.4254005384615 69.5867236153846
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 7.09283787524735
Final number of output spheres is: 60
Number of polar spheres: 31
Number of nonpolar spheres: 29
Number of spheres that are near neither polar nor nonpolar receptor atoms: 0
Final number of spheres that are from crystallographic ligand: 14