There are 36 ligand heavy atoms Ligand center of coords (x y z): 2.1245 9.75975 46.3154444444444 useligsph not on Starting number of spheres from sph/sph cluster 0: 970 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 721 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 706 Number of spheres polar: 240, nonpolar: 288, out of current total: 706 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -6.81131 12.55339 -2.22155 21.70941 34.37804 58.27060 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 289 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 213 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 2.1245 9.75975 46.3154444444444 Center point: 56 xyz: 2.34234 8.26617 46.24714 After continuity checking, number of spheres is: 184 Spheres center of coords (x y z): 2.0947952173913 9.51293163043478 44.3359864130435 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 16.1410380807312 8.895715156131 50.0737924600154 Average weighted-distance for final elimination is: 31.776561326893 Final number of output spheres is: 120 Number of polar spheres: 49 Number of nonpolar spheres: 37 Number of spheres that are near neither polar nor nonpolar receptor atoms: 34 Final number of spheres that are from crystallographic ligand: 0