usefragsph not on
There are 39 ligand heavy atoms
Ligand center of coords (x y z): 48.2253846153846 10.1243333333333 2.92779487179487
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1263
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 633
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 627
Number of spheres polar: 225, nonpolar: 260, out of current total: 627
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 38.23460 57.51266 0.13600 20.11489 -6.39478 10.53492
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 219
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 179
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 167
Spheres center of coords (x y z): 47.5895080239521 9.25633353293414 0.981582994011976
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.42806795858369
Final number of output spheres is: 45
Number of polar spheres: 16
Number of nonpolar spheres: 21
Number of spheres that are near neither polar nor nonpolar receptor atoms: 8
Final number of spheres that are from crystallographic ligand: 39