usefragsph not on
There are 28 ligand heavy atoms
Ligand center of coords (x y z): 47.1637142857143 12.4081428571429 2.40982142857143
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1024
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 548
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 543
Number of spheres polar: 174, nonpolar: 223, out of current total: 543
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 37.21538 56.41174 2.46479 22.38588 -6.10641 10.57522
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 201
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 162
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 146
Spheres center of coords (x y z): 46.6217175342466 12.3002314383562 0.0560957534246579
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.77039607427739
Final number of output spheres is: 45
Number of polar spheres: 12
Number of nonpolar spheres: 24
Number of spheres that are near neither polar nor nonpolar receptor atoms: 9
Final number of spheres that are from crystallographic ligand: 28