usefragsph not on
There are 40 ligand heavy atoms
Ligand center of coords (x y z): 15.6639 18.50935 78.0786
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1253
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 687
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 673
Number of spheres polar: 222, nonpolar: 257, out of current total: 673
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 5.72971 23.90712 10.48037 27.29552 68.13697 87.54582
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 363
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 324
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 298
Spheres center of coords (x y z): 15.4616111409396 18.9784298322148 77.3747225503356
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.21674470666541
Final number of output spheres is: 60
Number of polar spheres: 25
Number of nonpolar spheres: 23
Number of spheres that are near neither polar nor nonpolar receptor atoms: 12
Final number of spheres that are from crystallographic ligand: 40