usefragsph not on
There are 31 ligand heavy atoms
Ligand center of coords (x y z): 47.047 11.7308064516129 1.56167741935484
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 968
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 598
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 596
Number of spheres polar: 190, nonpolar: 245, out of current total: 596
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 37.05387 56.85021 1.73393 21.68286 -6.51795 10.57189
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 208
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 180
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 163
Spheres center of coords (x y z): 46.8605149079755 10.9733602453988 0.0538725766871165
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.91058020038275
Final number of output spheres is: 45
Number of polar spheres: 13
Number of nonpolar spheres: 25
Number of spheres that are near neither polar nor nonpolar receptor atoms: 7
Final number of spheres that are from crystallographic ligand: 31