usefragsph not on
There are 38 ligand heavy atoms
Ligand center of coords (x y z): -6.04826315789474 56.0331315789474 15.7479210526316
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 2045
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1209
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1207
Number of spheres polar: 326, nonpolar: 574, out of current total: 1207
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -16.04495 3.93363 46.07149 66.01275 6.17662 25.71813
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 672
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 581
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 556
Spheres center of coords (x y z): -6.36266008992805 56.381555971223 19.3708806654676
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.91418186209396
Final number of output spheres is: 60
Number of polar spheres: 30
Number of nonpolar spheres: 26
Number of spheres that are near neither polar nor nonpolar receptor atoms: 4
Final number of spheres that are from crystallographic ligand: 38