usefragsph not on
There are 38 ligand heavy atoms
Ligand center of coords (x y z): -6.16247368421052 56.25 8.28055263157895
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1089
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 710
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 708
Number of spheres polar: 264, nonpolar: 330, out of current total: 708
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -16.02515 3.81621 46.35526 66.21599 -1.35609 18.26515
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 254
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 203
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 182
Spheres center of coords (x y z): -7.10561681318681 56.7031804395604 9.73993835164835
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.9497632430541
Final number of output spheres is: 45
Number of polar spheres: 17
Number of nonpolar spheres: 21
Number of spheres that are near neither polar nor nonpolar receptor atoms: 7
Final number of spheres that are from crystallographic ligand: 38