Distance from surface specified: 1.80 There are 38 ligand heavy atoms Ligand center of coords (x y z): 74.6446052631579 22.7348684210526 31.467 Using crystallographic ligand as spheres for output Starting number of spheres from sph/sph cluster 0: 12680 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (14 angstroms): 11284 WARNING: removing a crystallographic sphere that is distance 1.93148466211875 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 1.73918774144714 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 1.82653195975324 angstroms from closest receptor atom WARNING: removing a crystallographic sphere that is distance 1.56382895484129 angstroms from closest receptor atom Number of spheres after removing too far (>7 angstroms) and too close to receptor (<2 angstroms): 11022 Number of spheres polar: 6763, nonpolar: 3364, out of current total: 11022 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 60.68440 88.61120 8.75260 36.71060 17.62720 45.35020 Number of spheres after removing spheres too close to each other (approximately <1.4 angstroms): 1255 Number of spheres after second pass removing spheres absolutely <0.9 from each other: 780 Crystallographic spheres are present, so doing continuity based on crystallographic spheres After continuity checking, number of spheres is: 774 Spheres center of coords (x y z): 75.743245736434 24.1762286821705 32.8770883720929 Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8) Average weighted-distance for final elimination is: 10.1672915863332 Final number of output spheres is: 200 Number of polar spheres: 126 Number of nonpolar spheres: 52 Number of spheres that are near neither polar nor nonpolar receptor atoms: 22 Final number of spheres that are from crystallographic ligand: 34