usefragsph not on
There are 31 ligand heavy atoms
Ligand center of coords (x y z): 19.3584516129032 12.895 56.9925483870968
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1112
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 641
WARNING: removing a crystallographic sphere that is distance 7.38405132701555 angstroms from closest receptor atom
WARNING: removing a crystallographic sphere that is distance 7.21136970346134 angstroms from closest receptor atom
WARNING: removing a crystallographic sphere that is distance 8.24523941435299 angstroms from closest receptor atom
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 622
Number of spheres polar: 143, nonpolar: 310, out of current total: 622
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 11.70277 29.35774 2.91803 22.88702 47.05426 63.87256
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 220
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 192
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 135
Spheres center of coords (x y z): 19.8721772592592 9.25973103703704 55.4780194814814
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.21631708228529
Final number of output spheres is: 45
Number of polar spheres: 11
Number of nonpolar spheres: 16
Number of spheres that are near neither polar nor nonpolar receptor atoms: 18
Final number of spheres that are from crystallographic ligand: 28