usefragsph not on
There are 16 ligand heavy atoms
Ligand center of coords (x y z): 34.009375 22.19025 27.4695
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1118
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 696
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 696
Number of spheres polar: 374, nonpolar: 261, out of current total: 696
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 24.01420 43.71002 12.26573 32.13200 17.50313 37.45704
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 307
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 254
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 184
Spheres center of coords (x y z): 35.5416157608696 24.022327173913 30.4078252717391
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.50144229860527
Final number of output spheres is: 60
Number of polar spheres: 31
Number of nonpolar spheres: 23
Number of spheres that are near neither polar nor nonpolar receptor atoms: 6
Final number of spheres that are from crystallographic ligand: 16