usefragsph not on
There are 31 ligand heavy atoms
Ligand center of coords (x y z): 19.3772903225806 12.9923870967742 56.9281290322581
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1167
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 657
WARNING: removing a crystallographic sphere that is distance 7.37204598466396 angstroms from closest receptor atom
WARNING: removing a crystallographic sphere that is distance 7.30919626224389 angstroms from closest receptor atom
WARNING: removing a crystallographic sphere that is distance 8.43355707871832 angstroms from closest receptor atom
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 640
Number of spheres polar: 126, nonpolar: 359, out of current total: 640
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 10.53387 29.27406 3.00974 22.98083 47.01167 62.44400
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 319
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 282
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 218
Spheres center of coords (x y z): 19.8406485321101 8.8695045412844 54.715608853211
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.36736199759588
Final number of output spheres is: 60
Number of polar spheres: 11
Number of nonpolar spheres: 31
Number of spheres that are near neither polar nor nonpolar receptor atoms: 18
Final number of spheres that are from crystallographic ligand: 28