usefragsph not on
There are 28 ligand heavy atoms
Ligand center of coords (x y z): 25.0445714285714 -0.893607142857143 53.44925
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 982
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 655
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 652
Number of spheres polar: 152, nonpolar: 275, out of current total: 652
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 15.38230 34.93653 -10.71818 8.98632 43.45023 62.64489
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 266
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 224
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 219
Spheres center of coords (x y z): 25.164259086758 0.050163789954338 52.5734615981735
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.34545073418381
Final number of output spheres is: 45
Number of polar spheres: 4
Number of nonpolar spheres: 31
Number of spheres that are near neither polar nor nonpolar receptor atoms: 10
Final number of spheres that are from crystallographic ligand: 28