usefragsph not on
There are 29 ligand heavy atoms
Ligand center of coords (x y z): 25.4481724137931 -0.473068965517241 53.5785172413793
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1082
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 673
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 671
Number of spheres polar: 142, nonpolar: 316, out of current total: 671
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 15.61116 35.43268 -10.33805 9.37897 43.60388 62.65695
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 262
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 218
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 209
Spheres center of coords (x y z): 25.4680832057416 -0.0436964593301433 52.5911160287082
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.08508192461441
Final number of output spheres is: 45
Number of polar spheres: 3
Number of nonpolar spheres: 33
Number of spheres that are near neither polar nor nonpolar receptor atoms: 9
Final number of spheres that are from crystallographic ligand: 29