There are 18 ligand heavy atoms Ligand center of coords (x y z): 34.316 22.7944444444444 27.6847222222222 useligsph not on Starting number of spheres from sph/sph cluster 0: 1104 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 876 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 876 Number of spheres polar: 480, nonpolar: 302, out of current total: 876 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 22.32773 46.29570 14.84428 34.73878 15.94719 39.33570 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 210 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 153 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 34.316 22.7944444444444 27.6847222222222 Center point: 12 xyz: 33.34915 22.10118 27.82855 After continuity checking, number of spheres is: 85 Final number of output spheres is: 85 Number of polar spheres: 46 Number of nonpolar spheres: 30 Number of spheres that are near neither polar nor nonpolar receptor atoms: 9 Final number of spheres that are from crystallographic ligand: 0