There are 20 ligand heavy atoms Ligand center of coords (x y z): 34.11375 22.9294 28.43985 useligsph not on Starting number of spheres from sph/sph cluster 0: 980 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 728 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 727 Number of spheres polar: 409, nonpolar: 251, out of current total: 727 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 22.28629 45.98161 16.41180 34.85469 16.64512 40.32346 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 208 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 141 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 34.11375 22.9294 28.43985 Center point: 40 xyz: 34.03945 23.56372 28.83724 After continuity checking, number of spheres is: 84 Final number of output spheres is: 84 Number of polar spheres: 45 Number of nonpolar spheres: 31 Number of spheres that are near neither polar nor nonpolar receptor atoms: 8 Final number of spheres that are from crystallographic ligand: 0