usefragsph not on
There are 25 ligand heavy atoms
Ligand center of coords (x y z): 26.35484 0.96196 52.16632
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1130
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 772
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 763
Number of spheres polar: 154, nonpolar: 381, out of current total: 763
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 16.52703 36.22749 -9.01674 10.67593 43.15835 59.40501
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 273
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 236
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 229
Spheres center of coords (x y z): 27.2324462008734 0.883238427947598 53.1391110480349
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.28318597176732
Final number of output spheres is: 45
Number of polar spheres: 13
Number of nonpolar spheres: 21
Number of spheres that are near neither polar nor nonpolar receptor atoms: 11
Final number of spheres that are from crystallographic ligand: 25