usefragsph not on
There are 20 ligand heavy atoms
Ligand center of coords (x y z): 34.18335 22.70935 28.45775
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1059
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 665
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 665
Number of spheres polar: 358, nonpolar: 264, out of current total: 665
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 24.21282 43.65488 16.25753 32.64281 18.47660 38.35490
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 178
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 134
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 104
Spheres center of coords (x y z): 35.1918311538462 24.4366661538462 30.7379807692308
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.00823718536184
Final number of output spheres is: 45
Number of polar spheres: 24
Number of nonpolar spheres: 20
Number of spheres that are near neither polar nor nonpolar receptor atoms: 1
Final number of spheres that are from crystallographic ligand: 20