There are 9 ligand heavy atoms Ligand center of coords (x y z): 32.9947777777778 21.584 26.2787777777778 useligsph not on Starting number of spheres from sph/sph cluster 0: 760 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 700 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 699 Number of spheres polar: 351, nonpolar: 233, out of current total: 699 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 21.05540 43.22088 12.37159 33.29557 14.72698 38.24293 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 219 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 159 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 32.9947777777778 21.584 26.2787777777778 Center point: 67 xyz: 32.85638 21.62400 25.82731 After continuity checking, number of spheres is: 96 Final number of output spheres is: 96 Number of polar spheres: 38 Number of nonpolar spheres: 35 Number of spheres that are near neither polar nor nonpolar receptor atoms: 23 Final number of spheres that are from crystallographic ligand: 0