usefragsph not on
There are 33 ligand heavy atoms
Ligand center of coords (x y z): 28.7523333333333 -0.292424242424242 53.0773333333333
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1184
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 847
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 843
Number of spheres polar: 315, nonpolar: 305, out of current total: 843
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 18.76283 38.73566 -10.27800 9.70006 43.09137 61.37624
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 454
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 390
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 384
Spheres center of coords (x y z): 27.69866109375 -0.231943645833333 51.7070446875
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.82790497974812
Final number of output spheres is: 60
Number of polar spheres: 22
Number of nonpolar spheres: 18
Number of spheres that are near neither polar nor nonpolar receptor atoms: 20
Final number of spheres that are from crystallographic ligand: 33