There are 12 ligand heavy atoms Ligand center of coords (x y z): 32.4425 21.3585 26.2671666666667 useligsph not on Starting number of spheres from sph/sph cluster 0: 862 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 787 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 784 Number of spheres polar: 490, nonpolar: 214, out of current total: 784 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 20.74536 44.44199 13.57575 33.35102 14.74053 38.26051 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 196 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 133 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 32.4425 21.3585 26.2671666666667 Center point: 67 xyz: 32.65870 21.19481 27.04710 After continuity checking, number of spheres is: 87 Final number of output spheres is: 87 Number of polar spheres: 64 Number of nonpolar spheres: 21 Number of spheres that are near neither polar nor nonpolar receptor atoms: 2 Final number of spheres that are from crystallographic ligand: 0