usefragsph not on
There are 12 ligand heavy atoms
Ligand center of coords (x y z): 32.4425 21.3585 26.2671666666667
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 862
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 670
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 670
Number of spheres polar: 395, nonpolar: 206, out of current total: 670
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 22.97853 42.37714 16.38500 31.22297 17.15288 36.24446
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 249
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 205
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 140
Spheres center of coords (x y z): 34.3098632142857 23.9214075 29.4389147857143
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.55895754865015
Final number of output spheres is: 60
Number of polar spheres: 35
Number of nonpolar spheres: 21
Number of spheres that are near neither polar nor nonpolar receptor atoms: 4
Final number of spheres that are from crystallographic ligand: 12