usefragsph not on
There are 35 ligand heavy atoms
Ligand center of coords (x y z): 29.2757142857143 0.2086 53.6101428571429
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1121
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 828
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 819
Number of spheres polar: 248, nonpolar: 317, out of current total: 819
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 19.39947 39.17667 -9.77795 9.69781 43.61307 60.93521
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 313
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 251
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 242
Spheres center of coords (x y z): 28.4444752479339 0.575549628099174 52.6874521487603
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.73267134914575
Final number of output spheres is: 45
Number of polar spheres: 7
Number of nonpolar spheres: 19
Number of spheres that are near neither polar nor nonpolar receptor atoms: 19
Final number of spheres that are from crystallographic ligand: 35