usefragsph not on
There are 24 ligand heavy atoms
Ligand center of coords (x y z): 34.2133333333333 23.62875 29.7673333333333
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1484
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 764
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 764
Number of spheres polar: 373, nonpolar: 293, out of current total: 764
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 24.37575 44.06047 13.73104 33.56117 19.85440 39.72799
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 207
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 166
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 144
Spheres center of coords (x y z): 36.2864609027778 25.7387509722222 30.6174976388889
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.5344403729892
Final number of output spheres is: 45
Number of polar spheres: 20
Number of nonpolar spheres: 21
Number of spheres that are near neither polar nor nonpolar receptor atoms: 4
Final number of spheres that are from crystallographic ligand: 24