usefragsph not on
There are 21 ligand heavy atoms
Ligand center of coords (x y z): 34.1688571428571 23.0375714285714 28.6310952380952
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1047
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 612
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 612
Number of spheres polar: 313, nonpolar: 247, out of current total: 612
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 24.17737 43.56953 13.85105 33.01595 18.63794 38.40789
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 273
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 234
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 177
Spheres center of coords (x y z): 34.6891801129944 24.6220781355932 30.7005479661017
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 3.53655048754786
Final number of output spheres is: 60
Number of polar spheres: 24
Number of nonpolar spheres: 34
Number of spheres that are near neither polar nor nonpolar receptor atoms: 2
Final number of spheres that are from crystallographic ligand: 21