usefragsph not on
There are 25 ligand heavy atoms
Ligand center of coords (x y z): 34.41456 23.34308 28.96192
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1184
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 677
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 677
Number of spheres polar: 379, nonpolar: 251, out of current total: 677
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 24.43816 44.22895 16.55580 33.33662 19.00507 38.89182
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 275
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 234
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 176
Spheres center of coords (x y z): 34.4884679545455 24.346498125 30.0783033522727
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 3.10671211884485
Final number of output spheres is: 60
Number of polar spheres: 21
Number of nonpolar spheres: 39
Number of spheres that are near neither polar nor nonpolar receptor atoms: 0
Final number of spheres that are from crystallographic ligand: 25