usefragsph not on
There are 17 ligand heavy atoms
Ligand center of coords (x y z): 39.1558823529412 37.1927647058823 30.7427058823529
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 982
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 640
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 635
Number of spheres polar: 198, nonpolar: 343, out of current total: 635
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 30.34471 49.06802 27.23222 47.05219 20.90110 40.64256
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 328
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 280
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 203
Spheres center of coords (x y z): 38.9565156650246 37.4828700492611 30.9026898029557
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.97318473931551
Final number of output spheres is: 60
Number of polar spheres: 6
Number of nonpolar spheres: 45
Number of spheres that are near neither polar nor nonpolar receptor atoms: 9
Final number of spheres that are from crystallographic ligand: 17