There are 20 ligand heavy atoms Ligand center of coords (x y z): 39.6937 38.39865 31.6123 useligsph not on Starting number of spheres from sph/sph cluster 0: 903 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 712 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 710 Number of spheres polar: 248, nonpolar: 317, out of current total: 710 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 27.71862 50.62609 26.44054 47.84934 19.63160 43.44130 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 239 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 191 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 39.6937 38.39865 31.6123 Center point: 155 xyz: 39.24269 38.40700 31.25475 After continuity checking, number of spheres is: 130 Spheres center of coords (x y z): 41.7560055384615 36.7324819230769 33.1651435384615 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 34.1166647024161 29.037279905716 28.651766057749 Average weighted-distance for final elimination is: 29.4112704751387 Final number of output spheres is: 120 Number of polar spheres: 32 Number of nonpolar spheres: 39 Number of spheres that are near neither polar nor nonpolar receptor atoms: 49 Final number of spheres that are from crystallographic ligand: 0