usefragsph not on
There are 27 ligand heavy atoms
Ligand center of coords (x y z): 35.165037037037 24.0035925925926 30.182037037037
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1249
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 638
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 638
Number of spheres polar: 357, nonpolar: 237, out of current total: 638
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 25.25726 45.16360 16.74200 33.98131 20.45125 39.82512
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 280
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 250
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 217
Spheres center of coords (x y z): 35.877037235023 24.7930223963134 31.0930267741935
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 3.54507628032083
Final number of output spheres is: 60
Number of polar spheres: 30
Number of nonpolar spheres: 25
Number of spheres that are near neither polar nor nonpolar receptor atoms: 5
Final number of spheres that are from crystallographic ligand: 27