usefragsph not on
There are 27 ligand heavy atoms
Ligand center of coords (x y z): 34.9080740740741 23.9471851851852 29.8035555555556
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1227
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 608
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 608
Number of spheres polar: 312, nonpolar: 235, out of current total: 608
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 24.92414 43.91478 16.28346 33.71250 19.81046 39.49989
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 290
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 247
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 212
Spheres center of coords (x y z): 35.5792681132076 24.8293391037736 31.2162286320755
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 3.53478603261469
Final number of output spheres is: 60
Number of polar spheres: 27
Number of nonpolar spheres: 28
Number of spheres that are near neither polar nor nonpolar receptor atoms: 5
Final number of spheres that are from crystallographic ligand: 27