usefragsph not on
There are 20 ligand heavy atoms
Ligand center of coords (x y z): 34.51495 22.8707 28.2848
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1174
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 695
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 695
Number of spheres polar: 382, nonpolar: 247, out of current total: 695
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 24.52219 44.15700 13.22841 30.87818 18.28905 38.22621
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 178
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 144
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 108
Spheres center of coords (x y z): 35.6370463888889 24.5966815740741 30.6377053703704
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.17940312722925
Final number of output spheres is: 45
Number of polar spheres: 20
Number of nonpolar spheres: 22
Number of spheres that are near neither polar nor nonpolar receptor atoms: 3
Final number of spheres that are from crystallographic ligand: 20