There are 27 ligand heavy atoms Ligand center of coords (x y z): 35.3198888888889 23.9036666666667 29.6700740740741 useligsph not on Starting number of spheres from sph/sph cluster 0: 1362 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 976 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 976 Number of spheres polar: 606, nonpolar: 282, out of current total: 976 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 23.68506 47.30647 16.21643 35.89555 17.70547 41.65512 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 261 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 174 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 35.3198888888889 23.9036666666667 29.6700740740741 Center point: 41 xyz: 35.54348 23.76187 29.51661 After continuity checking, number of spheres is: 109 Final number of output spheres is: 109 Number of polar spheres: 73 Number of nonpolar spheres: 29 Number of spheres that are near neither polar nor nonpolar receptor atoms: 7 Final number of spheres that are from crystallographic ligand: 0