There are 20 ligand heavy atoms Ligand center of coords (x y z): 33.9216 22.835 28.04405 useligsph not on Starting number of spheres from sph/sph cluster 0: 1156 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 881 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 881 Number of spheres polar: 535, nonpolar: 273, out of current total: 881 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 21.93075 45.91317 13.90723 34.78995 16.05760 39.99371 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 242 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 167 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 33.9216 22.835 28.04405 Center point: 13 xyz: 33.13830 23.47023 27.68035 After continuity checking, number of spheres is: 104 Final number of output spheres is: 104 Number of polar spheres: 71 Number of nonpolar spheres: 28 Number of spheres that are near neither polar nor nonpolar receptor atoms: 5 Final number of spheres that are from crystallographic ligand: 0