usefragsph not on
There are 24 ligand heavy atoms
Ligand center of coords (x y z): 18.6038333333333 13.8645416666667 54.250625
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1120
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 637
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 630
Number of spheres polar: 192, nonpolar: 303, out of current total: 630
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 8.70376 28.45110 3.88941 23.81220 44.26031 62.73940
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 349
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 310
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 265
Spheres center of coords (x y z): 17.989971735849 11.6426993207547 54.2419728679246
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.56568633809797
Final number of output spheres is: 60
Number of polar spheres: 20
Number of nonpolar spheres: 31
Number of spheres that are near neither polar nor nonpolar receptor atoms: 9
Final number of spheres that are from crystallographic ligand: 24