There are 12 ligand heavy atoms Ligand center of coords (x y z): 24.6611666666667 24.3835833333333 19.03975 useligsph not on Starting number of spheres from sph/sph cluster 0: 821 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 681 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 678 Number of spheres polar: 399, nonpolar: 189, out of current total: 678 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 13.03970 36.48120 12.60799 35.77627 7.06213 28.13078 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 195 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 131 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 24.6611666666667 24.3835833333333 19.03975 Center point: 4 xyz: 24.92977 24.96492 19.00995 After continuity checking, number of spheres is: 88 Final number of output spheres is: 88 Number of polar spheres: 55 Number of nonpolar spheres: 22 Number of spheres that are near neither polar nor nonpolar receptor atoms: 11 Final number of spheres that are from crystallographic ligand: 0