usefragsph not on
There are 12 ligand heavy atoms
Ligand center of coords (x y z): 24.6611666666667 24.3835833333333 19.03975
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 821
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 586
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 586
Number of spheres polar: 327, nonpolar: 190, out of current total: 586
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 14.77723 34.40530 14.38861 34.34779 9.18637 27.16775
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 266
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 214
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 168
Spheres center of coords (x y z): 25.6296545833333 21.4323619047619 15.5262650595238
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.31628792464224
Final number of output spheres is: 60
Number of polar spheres: 31
Number of nonpolar spheres: 24
Number of spheres that are near neither polar nor nonpolar receptor atoms: 5
Final number of spheres that are from crystallographic ligand: 12