usefragsph not on
There are 23 ligand heavy atoms
Ligand center of coords (x y z): 5.65734782608695 -35.6186086956522 -1.71904347826087
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1358
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 766
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 766
Number of spheres polar: 149, nonpolar: 517, out of current total: 766
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -4.31316 15.55700 -45.60516 -25.63190 -11.69452 7.69149
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 375
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 319
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 206
Spheres center of coords (x y z): 8.58912029126214 -33.9365260194175 -3.71732548543689
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.95683341443609
Final number of output spheres is: 60
Number of polar spheres: 16
Number of nonpolar spheres: 44
Number of spheres that are near neither polar nor nonpolar receptor atoms: 0
Final number of spheres that are from crystallographic ligand: 23