usefragsph not on
There are 24 ligand heavy atoms
Ligand center of coords (x y z): -5.2535 35.5136666666667 -1.86595833333333
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1360
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 781
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 781
Number of spheres polar: 144, nonpolar: 549, out of current total: 781
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -15.21097 4.70253 26.38831 45.48587 -11.83309 7.64862
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 252
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 208
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 180
Spheres center of coords (x y z): -9.62716755555556 35.7943198333333 -2.86873638888889
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 7.40786293880632
Final number of output spheres is: 45
Number of polar spheres: 15
Number of nonpolar spheres: 28
Number of spheres that are near neither polar nor nonpolar receptor atoms: 2
Final number of spheres that are from crystallographic ligand: 24