There are 27 ligand heavy atoms Ligand center of coords (x y z): 50.8265555555556 43.2287037037037 -2.52403703703704 Using crystallographic ligand as spheres for output Starting number of spheres from sph/sph cluster 0: 15790 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 10630 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 10630 Number of spheres polar: 5174, nonpolar: 4579, out of current total: 10630 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 38.82660 62.80660 31.23000 55.22480 -14.51280 9.47480 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 1632 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 664 Crystallographic spheres are present, so doing continuity based on crystallographic spheres After continuity checking, number of spheres is: 626 Spheres center of coords (x y z): 54.299249201278 43.2711884984026 -6.11454696485623 Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8) Average weighted-distance for final elimination is: 11.5547821554876 Final number of output spheres is: 120 Number of polar spheres: 40 Number of nonpolar spheres: 77 Number of spheres that are near neither polar nor nonpolar receptor atoms: 3 Final number of spheres that are from crystallographic ligand: 27