usefragsph not on
There are 48 ligand heavy atoms
Ligand center of coords (x y z): 36.7270625 60.8714583333333 44.0268541666667
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 2449
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1176
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1176
Number of spheres polar: 289, nonpolar: 599, out of current total: 1176
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 26.80676 46.72643 50.96440 69.26563 34.03081 53.85575
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 659
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 564
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 557
Spheres center of coords (x y z): 38.283993070018 59.4386908976661 43.1265491382406
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.46396884634082
Final number of output spheres is: 60
Number of polar spheres: 21
Number of nonpolar spheres: 33
Number of spheres that are near neither polar nor nonpolar receptor atoms: 6
Final number of spheres that are from crystallographic ligand: 48