usefragsph not on
There are 43 ligand heavy atoms
Ligand center of coords (x y z): 127.694163255814 18.5610232558139 41.5330697674419
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 2269
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1226
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1226
Number of spheres polar: 332, nonpolar: 596, out of current total: 1226
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 117.69701 137.61763 9.26905 28.51593 31.53433 51.52136
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 674
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 585
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 531
Spheres center of coords (x y z): 128.559669491526 20.0607531073446 37.9866435028249
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.44376310360691
Final number of output spheres is: 60
Number of polar spheres: 22
Number of nonpolar spheres: 30
Number of spheres that are near neither polar nor nonpolar receptor atoms: 8
Final number of spheres that are from crystallographic ligand: 43