usefragsph not on
There are 43 ligand heavy atoms
Ligand center of coords (x y z): 27.1091860465116 111.127697674419 127.057255116279
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 2222
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1124
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1124
Number of spheres polar: 325, nonpolar: 606, out of current total: 1124
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 17.26700 37.10891 101.13300 120.86700 117.49349 137.00739
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 600
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 528
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 504
Spheres center of coords (x y z): 28.7962083134921 109.229319662699 128.359510615079
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.12141508209254
Final number of output spheres is: 60
Number of polar spheres: 30
Number of nonpolar spheres: 25
Number of spheres that are near neither polar nor nonpolar receptor atoms: 5
Final number of spheres that are from crystallographic ligand: 43