usefragsph not on
There are 39 ligand heavy atoms
Ligand center of coords (x y z): 7.62105128205128 46.194717948718 69.0900769230769
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 2003
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 926
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 926
Number of spheres polar: 341, nonpolar: 397, out of current total: 926
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -2.30611 17.52753 38.47041 56.05893 60.15481 79.04984
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 506
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 439
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 431
Spheres center of coords (x y z): 6.31636777262181 46.4072707192576 70.429168700696
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.59782090380864
Final number of output spheres is: 60
Number of polar spheres: 25
Number of nonpolar spheres: 30
Number of spheres that are near neither polar nor nonpolar receptor atoms: 5
Final number of spheres that are from crystallographic ligand: 39