usefragsph not on
There are 44 ligand heavy atoms
Ligand center of coords (x y z): 29.776 -7.14740909090909 1.29763636363636
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 2479
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1214
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1214
Number of spheres polar: 308, nonpolar: 632, out of current total: 1214
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 19.78876 39.76086 -17.06474 2.84621 -8.68927 11.28333
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 341
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 288
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 276
Spheres center of coords (x y z): 29.2293160869565 -4.49190050724637 3.43748072463768
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.07247514278488
Final number of output spheres is: 45
Number of polar spheres: 7
Number of nonpolar spheres: 30
Number of spheres that are near neither polar nor nonpolar receptor atoms: 8
Final number of spheres that are from crystallographic ligand: 44