There are 18 ligand heavy atoms Ligand center of coords (x y z): 51.8371666666667 101.549777777778 29.635 useligsph not on Starting number of spheres from sph/sph cluster 0: 1265 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 909 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 909 Number of spheres polar: 331, nonpolar: 346, out of current total: 909 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 39.89347 63.58789 89.57691 113.50971 17.66621 41.63182 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 354 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 258 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 51.8371666666667 101.549777777778 29.635 Center point: 78 xyz: 51.86567 101.64092 29.69817 After continuity checking, number of spheres is: 210 Spheres center of coords (x y z): 54.0838812857143 101.949216619048 35.1340100952381 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 53.3672166874221 107.031586550436 28.0612602739726 Average weighted-distance for final elimination is: 27.0538111011739 Final number of output spheres is: 120 Number of polar spheres: 41 Number of nonpolar spheres: 38 Number of spheres that are near neither polar nor nonpolar receptor atoms: 41 Final number of spheres that are from crystallographic ligand: 0