usefragsph not on
There are 28 ligand heavy atoms
Ligand center of coords (x y z): -7.12842857142857 -5.02017857142857 -5.32178571428572
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1844
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 642
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 642
Number of spheres polar: 138, nonpolar: 461, out of current total: 642
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -17.08482 2.76271 -14.97874 4.97459 -15.30582 4.67684
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 171
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 142
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 95
Spheres center of coords (x y z): -6.93615336842105 -4.81751157894737 -5.04767894736842
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 2.50741089497742
Final number of output spheres is: 45
Number of polar spheres: 7
Number of nonpolar spheres: 33
Number of spheres that are near neither polar nor nonpolar receptor atoms: 5
Final number of spheres that are from crystallographic ligand: 28